HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1

Genome build
GRCh37 / hg19
Ensembl gene ID
ENSG00000196735
References
gnomAD, Ensembl, UCSC Browser,
Other studies
ASC, BipEx, Epi25

Gene Result

ClassConsequenceCasesControlsOdds RatioCase/Control P-valueDe NovosDe Novo P-value
PTV0500.617
Missense (MPC ≥ 3)00
Missense (3 > MPC ≥ 2)362.010.418

Meta-analysis P-value: 0.617

Meta-analysis Q-value: 1.00

Constraint

CategoryExp. SNVsObs. SNVsConstraint metrics
Synonymous48.635Z = 1.53o/e = 0.72
Missense129.177Z = 1.63o/e = 0.6
pLoF9.44pLI = 0.02o/e = 0.42
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